NucleosomeDB 7K63

Exp. Method	EM
Resolution, Å	3.03
Release Date	2020-11-25
Update Date	2024-03-06
Authors	Zhou, B.R., Feng, H., Kale, S., Fox, T., Khant, H., de Val, N., Ghirlando, R., Panchenko, A.R., Bai, Y.
Publication	PMID: 33238161
doi	10.1016/j.molcel.2020.10.038
Related structures	7K60, 7K61, 7K5Y, 7K5X
RCSB PDB	7K63
EMDB	EMD-22687
Q-score	0.492

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Homo sapiens	P68431
H3	Distal	A	canonical H3	Homo sapiens	P68431
H4	Proximal	F	canonical H4	Homo sapiens	P62805
H4	Distal	B	canonical H4	Homo sapiens	P62805
H2A	Proximal	G	canonical H2A	Homo sapiens	P04908
H2A	Distal	C	canonical H2A	Homo sapiens	P04908
H2B	Proximal	H	canonical H2B	Homo sapiens	P06899
H2B	Distal	D	canonical H2B	Homo sapiens	P06899

Chain	HistoneDB Variant	UID
U	H1.4	P10412

Chain	Name	UID
M	scFv20	NA
N	scFv20	NA

Chain	Variant	Length
I	601	197
J	601	197

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7K63