NucleosomeDB 8VOB

Exp. Method	EM
Resolution, Å	3.1
Release Date	2025-01-15
Update Date	2025-03-05
Authors	Cookis, T., Lydecker, A., Sauer, P., Kasinath, V., Nogales, E.
doi	10.1038/s41594-024-01452-x
Publication	PMID: 39774834
Related structures
RCSB PDB	8VOB
EMDB	EMD-43373
Q-score	0.375

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	O	canonical H3	Homo sapiens	Q71DI3
H3	Distal	I	canonical H3	Homo sapiens	Q71DI3
H4	Proximal	Q	canonical H4	Homo sapiens	P62805
H4	Distal	J	canonical H4	Homo sapiens	P62805
H2A	Proximal	R	canonical H2A	Homo sapiens	P0C0S8
H2A	Distal	K	canonical H2A	Homo sapiens	P0C0S8
H2B	Proximal	S	canonical H2B	Xenopus laevis	P02281
H2B	Distal	M	canonical H2B	Xenopus laevis	P02281

Chain	Variant	Length
D	601	157
H	601	157

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain I

H4d chain J

H2Ad chain K

H2Bd chain M

H3p chain O

H4p chain Q

H2Ap chain R

H2Bp chain S

DNA top chain D, bot chain H

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8VOB