NucleosomeDB 8U14

Exp. Method	EM
Resolution, Å	3.9
Release Date	2024-01-17
Update Date	2024-03-20
Authors	Hu, Q., Zhao, D., Cui, G., Bhandari, J., Thompson, J.R., Botuyan, M.V., Mer, G.
Publication	PMID: 38242129
doi	10.1016/j.molcel.2023.12.036
RCSB PDB	8U14
EMDB	EMD-41801
Q-score	0.352

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Homo sapiens	P68431
H3	Distal	E	canonical H3	Homo sapiens	P68431
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	canonical H2A	Homo sapiens	P04908
H2A	Distal	G	canonical H2A	Homo sapiens	P04908
H2B	Proximal	D	canonical H2B	Homo sapiens	P06899
H2B	Distal	H	canonical H2B	Homo sapiens	P06899

Chain	Name	UID
K	E3 ubiquitin-protein ligase RNF168	Q8IYW5
L	Ubiquitin-conjugating enzyme E2 D3	P61077

Chain	Variant	Length
I	601	147
J	601	146

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8U14