8T9H

Catalytic and non-catalytic mechanisms of histone H4 lysine 20 methyltransferase SUV420H1

Exp. Method EM
Resolution, Å 3.37
Release Date 2023-09-13
Update Date 2023-09-13
Authors Abini-Agbomson, S., Armache, K.-J.
Publication PMID:
doi
RCSB PDB 8T9H
EMDB EMD-41111
Q-score 0.393
Core histones in Nucleosome-like particles:
Side Chain HistoneDB Variant Taxa UID
H3 Proximal A canonical H3 Xenopus laevis P84233
Distal E canonical H3 Xenopus laevis P84233
H4 Proximal F canonical H4 Xenopus laevis P62799
Distal B canonical H4 Xenopus laevis P62799
H2A Proximal G canonical H2A Xenopus laevis P06897
Distal C canonical H2A Xenopus laevis P06897
H2B Proximal H canonical H2B Xenopus laevis P02281
Distal D canonical H2B Xenopus laevis P02281
Other proteins:
Chain Name UID
K Histone-lysine N-methyltransferase KMT5B Q4FZB7
DNA:
Chain Variant Length
I 601 99
J 601 102

H3

H4

H2A

H2B

DNA

Other


Chain Bfactor Q-score Local Resolution

Aligned nucleosome coordinates

Nucleosome reference frame definition

DNA relative twist and local base step parameters

Sequence on X-axis is numbered relative to the dyad base pair.

Atomic contacts between nucleosomal entities.


Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.