NucleosomeDB 8SIY

Exp. Method	EM
Resolution, Å	2.9
Release Date	2023-08-02
Update Date	2023-11-15
Authors	Sahu, S., Ekundayo, B.E., Kumar, A., Bleichert, F.
Publication	PMID: 37551430
doi	10.15252/embj.2023114654
Related structures	8SIU
RCSB PDB	8SIY
EMDB	EMD-40522
Q-score	0.497

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	C	canonical H3	Xenopus laevis	P84233
H3	Distal	G	canonical H3	Xenopus laevis	P84233
H4	Proximal	D	canonical H4	Xenopus laevis	P62799
H4	Distal	H	canonical H4	Xenopus laevis	P62799
H2A	Proximal	E	canonical H2A	Xenopus laevis	P06897
H2A	Distal	I	canonical H2A	Xenopus laevis	P06897
H2B	Proximal	F	canonical H2B	Xenopus laevis	P02281
H2B	Distal	J	canonical H2B	Xenopus laevis	P02281

Chain	Name	UID
A	Leucine-rich repeat and WD repeat-containing protein 1	A0A140UHX1
B	Origin recognition complex subunit 2	Q75PQ8

Chain	Variant	Length
K	601	147
L	601	147

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain C

H4p chain D

H2Ap chain E

H2Bp chain F

H3d chain G

H4d chain H

H2Ad chain I

H2Bd chain J

DNA top chain K, bot chain L

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8SIY