NucleosomeDB 8OX1

Exp. Method	EM
Resolution, Å	2.7
Release Date	2023-08-30
Update Date	2023-09-06
Authors	Hu, H., van Roon, A.M., Ghanim, G.E., Ahsan, B., Oluwole, A.O., Peak-Chew, S.Y., Robinson, C.V., Nguyen, T.H.D.
Publication	PMID: 37624885
doi	10.1126/sciadv.adi4148
RCSB PDB	8OX1
EMDB	EMD-17252
Q-score	0.579

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Homo sapiens	P68431
H3	Distal	A	canonical H3	Homo sapiens	P68431
H4	Proximal	F	canonical H4	Homo sapiens	P62805
H4	Distal	B	canonical H4	Homo sapiens	P62805
H2A	Proximal	G	canonical H2A	Homo sapiens	Q93077
H2A	Distal	C	canonical H2A	Homo sapiens	Q93077
H2B	Proximal	H	canonical H2B	Homo sapiens	P62807
H2B	Distal	D	canonical H2B	Homo sapiens	P62807

Chain	Name	UID
L	Telomeric repeat-binding factor 1	P54274
M	Telomeric repeat-binding factor 1	P54274

Chain	Variant	Length
I	telomeric_human	145
J	telomeric_human	145

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain J, bot chain I

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8OX1