NucleosomeDB 8JHF

Exp. Method	EM
Resolution, Å	3.68
Release Date	2023-11-15
Update Date	2023-12-20
Authors	Lin, F., Zhang, R., Shao, W., Lei, C., Ma, M., Zhang, Y., Wen, Z., Li, W.
Publication	PMID: 38052811
doi	10.1038/s41421-023-00620-5
RCSB PDB	8JHF
EMDB	EMD-36264
Q-score	0.433

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Homo sapiens	P68431
H3	Distal	E	canonical H3	Homo sapiens	P68431
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	H2A.Z	Homo sapiens	P0C0S5
H2A	Distal	G	H2A.Z	Homo sapiens	P0C0S5
H2B	Proximal	D	canonical H2B	Homo sapiens	O60814
H2B	Distal	H	canonical H2B	Homo sapiens	O60814

Chain	Name	UID
K	Histone-lysine N-methyltransferase KMT5B	Q4FZB7

Chain	Variant	Length
I	601	160
J	601	160

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8JHF