NucleosomeDB 8G57

Exp. Method	EM
Resolution, Å	3.07
Release Date	2023-04-26
Update Date	2024-06-19
Authors	Chio, U.S., Rechiche, O., Bryll, A.R., Zhu, J., Leith, E.M., Feldman, J.L., Peterson, C.L., Tan, S., Armache, J.P.
doi	10.1126/sciadv.adf7586
Publication	PMID: 37058572
Related structures
RCSB PDB	8G57
EMDB	EMD-29735
Q-score	0.493

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Xenopus laevis	P84233
H3	Distal	E	canonical H3	Xenopus laevis	P84233
H4	Proximal	B	canonical H4	Xenopus laevis	P62799
H4	Distal	F	canonical H4	Xenopus laevis	P62799
H2A	Proximal	C	canonical H2A	Homo sapiens	P04908
H2A	Distal	G	canonical H2A	Homo sapiens	P04908
H2B	Proximal	D	canonical H2B	Homo sapiens	P06899
H2B	Distal	H	canonical H2B	Homo sapiens	P06899

Chain	Name	UID
K	NAD-dependent protein deacylase sirtuin-6	Q8N6T7

Chain	Variant	Length
I	601	150
J	601	150

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain J, bot chain I

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8G57