NucleosomeDB 8CWW

Exp. Method	EM
Resolution, Å	2.74
Release Date	2023-06-07
Update Date	2024-04-10
Authors	Milano, C.R., Ur, S.N., Gu, Y., Zhang, J., Allison, R., Brown, G., Neale, M.J., Tromer, E.C., Corbett, K.D., Hochwagen, A.
Publication	PMID: 38332377
doi	10.1038/s44318-024-00034-3
RCSB PDB	8CWW
EMDB	EMD-27030
Q-score	0.574

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Xenopus laevis	P84233
H3	Distal	A	canonical H3	Xenopus laevis	P84233
H4	Proximal	F	canonical H4	Xenopus laevis	P62799
H4	Distal	B	canonical H4	Xenopus laevis	P62799
H2A	Proximal	G	canonical H2A	Xenopus laevis	P06897
H2A	Distal	C	canonical H2A	Xenopus laevis	P06897
H2B	Proximal	H	canonical H2B	Xenopus laevis	P02281
H2B	Distal	D	canonical H2B	Xenopus laevis	P02281

Chain	Name	UID
P	Meiosis-specific protein HOP1	P20050

Chain	Variant	Length
I	601	146
J	601	146

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain J, bot chain I

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

8CWW