NucleosomeDB 7YQK

Exp. Method	EM
Resolution, Å	3.38
Release Date	2022-08-17
Update Date	2023-02-15
Authors	Ai, H., Chu, G.C., Gong, Q., Tong, Z.B., Deng, Z., Liu, X., Yang, F., Xu, Z., Li, J.B., Tian, C., Liu, L.
Publication	PMID: 36166692
doi	10.1021/jacs.2c06156
RCSB PDB	7YQK
EMDB	EMD-34028
Q-score	0.424

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Homo sapiens	P68431
H3	Distal	E	canonical H3	Homo sapiens	P68431
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	H2A.X	Homo sapiens	P16104
H2A	Distal	G	H2A.X	Homo sapiens	P16104
H2B	Proximal	D	canonical H2B	Homo sapiens	O60814
H2B	Distal	H	canonical H2B	Homo sapiens	O60814

Chain	Variant	Length
I	601	145
J	601	145

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7YQK