7XYG

Cryo-EM structure of Fft3-nucleosome complex with Fft3 bound to SHL+3 position of the nucleosome

Exp. Method EM
Resolution, Å 5.4
Release Date 2023-12-06
Update Date 2023-12-06
Authors Nan, Z., Tao, J., Yangao, H.
Publication PMID:
doi
RCSB PDB 7XYG
EMDB EMD-33521
Q-score 0.219
Core histones in Nucleosome-like particles:
Side Chain HistoneDB Variant Taxa UID
H3 Proximal A canonical H3 Drosophila melanogaster P02299
Distal E canonical H3 Drosophila melanogaster P02299
H4 Proximal B canonical H4 Drosophila melanogaster P84040
Distal F canonical H4 Drosophila melanogaster P84040
H2A Proximal C canonical H2A Drosophila melanogaster P84051
Distal G canonical H2A Drosophila melanogaster P84051
H2B Proximal D canonical H2B Drosophila melanogaster P02283
Distal H canonical H2B Drosophila melanogaster P02283
Other proteins:
Chain Name UID
K ATP-dependent helicase fft3 O42861
DNA:
Chain Variant Length
I 601 146
J 601 146

H3

H4

H2A

H2B

DNA

Other


Chain Bfactor Q-score Local Resolution

Aligned nucleosome coordinates

Nucleosome reference frame definition

DNA relative twist and local base step parameters

Sequence on X-axis is numbered relative to the dyad base pair.

Atomic contacts between nucleosomal entities.


Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.