NucleosomeDB 7XD1

Exp. Method	EM
Resolution, Å	3.2
Release Date	2022-04-20
Update Date	2022-09-07
Authors	Ai, H., Sun, M., Liu, A., Sun, Z., Liu, T., Cao, L., Liang, L., Qu, Q., Li, Z., Deng, Z., Tong, Z., Chu, G., Tian, X., Deng, H., Zhao, S., Li, J.B., Lou, Z., Liu, L.
Publication	PMID: 35739357
doi	10.1038/s41589-022-01067-7
RCSB PDB	7XD1
EMDB	EMD-33132
Q-score	0.558

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Homo sapiens	P68431
H3	Distal	A	canonical H3	Homo sapiens	P68431
H4	Proximal	F	canonical H4	Homo sapiens	P62805
H4	Distal	B	canonical H4	Homo sapiens	P62805
H2A	Proximal	G	canonical H2A	Homo sapiens	P04908
H2A	Distal	C	canonical H2A	Homo sapiens	P04908
H2B	Proximal	H	canonical H2B	Homo sapiens	O60814
H2B	Distal	D	canonical H2B	Homo sapiens	O60814

Chain	Variant	Length
I	601	147
J	601	147

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain J, bot chain I

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7XD1