NucleosomeDB 7PF4

Exp. Method	EM
Resolution, Å	4
Release Date	2022-08-03
Update Date	2022-08-03
Authors	Dombrowski, M., Engeholm, M., Dienemann, C., Dodonova, S., Cramer, P.
Publication	PMID: 35581345
doi	10.1038/s41594-022-00768-w
RCSB PDB	7PF4
EMDB	EMD-13367
Q-score	0.274

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	K	canonical H3	Homo sapiens	Q71DI3
H3	Distal	O	canonical H3	Homo sapiens	Q71DI3
H4	Proximal	L	canonical H4	Homo sapiens	P62805
H4	Distal	P	canonical H4	Homo sapiens	P62805
H2A	Proximal	M	canonical H2A	Homo sapiens	P04908
H2A	Distal	Q	canonical H2A	Homo sapiens	P04908
H2B	Proximal	N	canonical H2B	Homo sapiens	O60814
H2B	Distal	R	canonical H2B	Homo sapiens	O60814

Chain	Variant	Length
I	601	167
J	601	167

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain K

H4p chain L

H2Ap chain M

H2Bp chain N

H3d chain O

H4d chain P

H2Ad chain Q

H2Bd chain R

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7PF4