7PEY

Nucleosome 3 of the 4x177 nucleosome array containing H1

Exp. Method EM
Resolution, Å 4.5
Release Date 2022-08-03
Update Date 2022-08-03
Authors Dombrowski, M., Engeholm, M., Dienemann, C., Dodonova, S., Cramer, P.
Publication PMID: 35581345
doi 10.1038/s41594-022-00768-w
RCSB PDB 7PEY
EMDB EMD-13361
Q-score 0.281
Core histones in Nucleosome-like particles:
Side Chain HistoneDB Variant Taxa UID
H3 Proximal K canonical H3 Homo sapiens Q71DI3
Distal O canonical H3 Homo sapiens Q71DI3
H4 Proximal L canonical H4 Homo sapiens P62805
Distal P canonical H4 Homo sapiens P62805
H2A Proximal M canonical H2A Homo sapiens P04908
Distal Q canonical H2A Homo sapiens P04908
H2B Proximal N canonical H2B Homo sapiens O60814
Distal R canonical H2B Homo sapiens O60814
DNA:
Chain Variant Length
I 601 171
J 601 171

H3

H4

H2A

H2B

DNA

Other


Aligned nucleosome coordinates

Nucleosome reference frame definition

DNA relative twist and local base step parameters

Sequence on X-axis is numbered relative to the dyad base pair.

Atomic contacts between nucleosomal entities.


Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.