NucleosomeDB 7KBD

Exp. Method	EM
Resolution, Å	3.38
Release Date	2021-09-15
Update Date	2021-11-17
Authors	Arimura, Y., Shih, R.M., Froom, R., Funabiki, H.
Publication	PMID: 34478647
doi	10.1016/j.molcel.2021.08.010
RCSB PDB	7KBD
EMDB	EMD-22790
Q-score	0.489

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Xenopus laevis	P84233
H3	Distal	A	canonical H3	Xenopus laevis	P84233
H4	Proximal	F	canonical H4	Xenopus laevis	P62799
H4	Distal	B	canonical H4	Xenopus laevis	P62799
H2A	Proximal	G	canonical H2A	Xenopus laevis	Q6DKE3
H2A	Distal	C	canonical H2A	Xenopus laevis	Q6DKE3
H2B	Proximal	H	canonical H2B	Xenopus laevis	P02281
H2B	Distal	D	canonical H2B	Xenopus laevis	P02281

Chain	Variant	Length
I	601	151
J	601	151

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain J, bot chain I

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7KBD