7EG6

Snf5 Finger Helix bound to the nucleosome

Exp. Method EM
Resolution, Å 3.1
Release Date 2022-01-12
Update Date 2022-01-12
Authors He, Z.Y., Chen, K.J., Ye, Y.P., Chen, Z.C.
Publication PMID: 33907182
doi 10.1038/s41421-021-00262-5
RCSB PDB 7EG6
EMDB EMD-31106
Q-score 0.513
Core histones in Nucleosome-like particles:
Side Chain HistoneDB Variant Taxa UID
H3 Proximal E canonical H3 Xenopus laevis P84233
Distal A canonical H3 Xenopus laevis P84233
H4 Proximal F canonical H4 Xenopus laevis P62799
Distal B canonical H4 Xenopus laevis P62799
H2A Proximal G canonical H2A Xenopus laevis P06897
Distal C canonical H2A Xenopus laevis P06897
H2B Proximal H canonical H2B Xenopus laevis P02281
Distal D canonical H2B Xenopus laevis P02281
Other proteins:
Chain Name UID
M SWI/SNF chromatin-remodeling complex subunit SNF5 P18480
DNA:
Chain Variant Length
I 601 146
J 601 146

H3

H4

H2A

H2B

DNA

Other


Chain Bfactor Q-score

Aligned nucleosome coordinates

Nucleosome reference frame definition

DNA relative twist and local base step parameters

Sequence on X-axis is numbered relative to the dyad base pair.

Atomic contacts between nucleosomal entities.


Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.