NucleosomeDB 7EA8

Exp. Method	EM
Resolution, Å	3.1
Release Date	2021-07-14
Update Date	2024-03-27
Authors	Liu, Y., Zhang, Y., Xue, H., Cao, M., Bai, G., Mu, Z., Yao, Y., Sun, S., Fang, D., Huang, J.
Publication	PMID: 33972509
doi	10.1038/s41421-021-00261-6
RCSB PDB	7EA8
EMDB	EMD-31040
Q-score	0.509

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	H3.3	Homo sapiens	Q6PI79
H3	Distal	E	H3.3	Homo sapiens	Q6PI79
H4	Proximal	B	canonical H4	Homo sapiens	P62799
H4	Distal	F	canonical H4	Homo sapiens	P62799
H2A	Proximal	C	canonical H2A	Homo sapiens	P20671
H2A	Distal	G	canonical H2A	Homo sapiens	P20671
H2B	Proximal	D	canonical H2B	Homo sapiens	P06899
H2B	Distal	H	canonical H2B	Homo sapiens	P06899

Chain	Name	UID
L	Histone-lysine N-methyltransferase SETD2	Q9BYW2

Chain	Variant	Length
I	601	122
J	601	122

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

7EA8