NucleosomeDB 6Y5E

Exp. Method	EM
Resolution, Å	3.15
Release Date	2020-09-23
Update Date	2020-12-09
Authors	Pathare, G.R., Decout, A., Gluck, S., Cavadini, S., Makasheva, K., Hovius, R., Kempf, G., Weiss, J., Kozicka, Z., Guey, B., Melenec, P., Fierz, B., Thoma, N.H., Ablasser, A.
Publication	PMID: 32911482
doi	10.1038/s41586-020-2750-6
RCSB PDB	6Y5E
EMDB	EMD-10695
Q-score	0.43

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Homo sapiens	Q71DI3
H3	Distal	E	canonical H3	Homo sapiens	Q71DI3
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	canonical H2A	Homo sapiens	Q16777
H2A	Distal	G	canonical H2A	Homo sapiens	Q16777
H2B	Proximal	D	canonical H2B	Homo sapiens	O60814
H2B	Distal	H	canonical H2B	Homo sapiens	O60814

Chain	Name	UID
K	Cyclic GMP-AMP synthase	Q8N884

Chain	Variant	Length
I	601	153
J	601	153

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6Y5E