NucleosomeDB 6TEM

Exp. Method	EM
Resolution, Å	3.9
Release Date	2020-04-08
Update Date	2020-06-10
Authors	Boopathi, R., Danev, R., Khoshouei, M., Kale, S., Nahata, S., Ramos, L., Angelov, D., Dimitrov, S., Hamiche, A., Petosa, C., Bednar, J.
Publication	PMID: 32313946
doi	10.1093/nar/gkaa246
RCSB PDB	6TEM
EMDB	EMD-10822

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	cenH3	Homo sapiens	P49450
H3	Distal	E	cenH3	Homo sapiens	P49450
H4	Proximal	B	canonical H4	Xenopus laevis	P62799
H4	Distal	F	canonical H4	Xenopus laevis	P62799
H2A	Proximal	C	canonical H2A	Xenopus laevis	P06897
H2A	Distal	G	canonical H2A	Xenopus laevis	P06897
H2B	Proximal	D	canonical H2B	Xenopus laevis	P02281
H2B	Distal	H	canonical H2B	Xenopus laevis	P02281

Chain	Variant	Length
I	601	130
J	601	130

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6TEM