NucleosomeDB 6SEF

Exp. Method	EM
Resolution, Å	3.7
Release Date	2019-08-14
Update Date	2019-11-06
Authors	Ali-Ahmad, A., Bilokapic, S., Schafer, I.B., Halic, M., Sekulic, N.
Publication	PMID: 31475439
doi	10.15252/embr.201948913
RCSB PDB	6SEF
EMDB	EMD-10154
Q-score	0.372

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	cenH3	Homo sapiens	P49450
H3	Distal	E	cenH3	Homo sapiens	P49450
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	canonical H2A	Homo sapiens	Q6FI13
H2A	Distal	G	canonical H2A	Homo sapiens	Q6FI13
H2B	Proximal	D	canonical H2B	Homo sapiens	P62807
H2B	Distal	H	canonical H2B	Homo sapiens	P62807

Chain	Name	UID
V	Centromere protein C	Q03188

Chain	Variant	Length
I	601	145
J	601	145

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6SEF