NucleosomeDB 6SEE

Exp. Method	EM
Resolution, Å	4.2
Release Date	2019-08-14
Update Date	2019-11-06
Authors	Ali-Ahmad, A., Bilokapic, S., Schafer, I.B., Halic, M., Sekulic, N.
Publication	PMID: 31475439
doi	10.15252/embr.201948913
RCSB PDB	6SEE
EMDB	EMD-10153
Q-score	0.309

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	cenH3	Homo sapiens	P49450
H3	Distal	A	cenH3	Homo sapiens	P49450
H4	Proximal	F	canonical H4	Homo sapiens	P62805
H4	Distal	B	canonical H4	Homo sapiens	P62805
H2A	Proximal	G	canonical H2A	Homo sapiens	Q6FI13
H2A	Distal	C	canonical H2A	Homo sapiens	Q6FI13
H2B	Proximal	H	canonical H2B	Homo sapiens	P62807
H2B	Distal	D	canonical H2B	Homo sapiens	P62807

Chain	Name	UID
V	Centromere protein C	Q03188

Chain	Variant	Length
I	601	145
J	601	145

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6SEE