NucleosomeDB 6M4D

Exp. Method	EM
Resolution, Å	4.4
Release Date	2020-09-23
Update Date	2024-03-27
Authors	Zhou, M., Dai, L., Li, C., Shi, L., Huang, Y., Guo, Z., Wu, F., Zhu, P., Zhou, Z.
Publication	PMID: 33073403
doi	10.15252/embj.2020105907
RCSB PDB	6M4D
EMDB	EMD-30076
Q-score	0.311

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	E	canonical H3	Homo sapiens	P68431
H3	Distal	A	canonical H3	Homo sapiens	P68431
H4	Proximal	F	canonical H4	Homo sapiens	P62805
H4	Distal	B	canonical H4	Homo sapiens	P62805
H2A	Proximal	G	H2A.Z	Homo sapiens	Q71UI9
H2A	Distal	C	H2A.Z	Homo sapiens	Q71UI9
H2B	Proximal	H	canonical H2B	Homo sapiens	Q16778
H2B	Distal	D	canonical H2B	Homo sapiens	Q16778

Chain	Variant	Length
I	601	125
J	601	125

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3d chain A

H4d chain B

H2Ad chain C

H2Bd chain D

H3p chain E

H4p chain F

H2Ap chain G

H2Bp chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6M4D