NucleosomeDB 6J99

Exp. Method	EM
Resolution, Å	4.1
Release Date	2019-02-27
Update Date	2019-04-10
Authors	Yao, T., Jing, W., Hu, Z., Tan, M., Cao, M., Wang, Q., Li, Y., Yuan, G., Lei, M., Huang, J.
Publication	PMID: 30770869
doi	10.1038/s41422-019-0146-7
RCSB PDB	6J99
EMDB	EMD-9783
Q-score	0.132

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Xenopus laevis	A0A310TTQ1
H3	Distal	E	canonical H3	Xenopus laevis	A0A310TTQ1
H4	Proximal	B	canonical H4	Xenopus laevis	P62799
H4	Distal	F	canonical H4	Xenopus laevis	P62799
H2A	Proximal	C	canonical H2A	Xenopus laevis	Q6AZJ8
H2A	Distal	G	canonical H2A	Xenopus laevis	Q6AZJ8
H2B	Proximal	D	canonical H2B	Xenopus laevis	P02281
H2B	Distal	H	canonical H2B	Xenopus laevis	P02281

Chain	Name	UID
K	Histone-lysine N-methyltransferase, H3 lysine-79 specific	Q8TEK3
L	Ubiquitin	P62979

Chain	Variant	Length
I	601	144
J	601	145

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6J99