NucleosomeDB 6FTX

Exp. Method	EM
Resolution, Å	4.5
Release Date	2018-08-08
Update Date	2018-10-17
Authors	Sundaramoorthy, R., Hughes, A.L., El-Mkami, H., Norman, D.G., Ferreira, H., Owen-Hughes, T.
Publication	PMID: 30079888
doi	10.7554/eLife.35720
RCSB PDB	6FTX
EMDB	EMD-4318
Q-score	0.23

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	canonical H3	Petromyzon marinus	S4RAZ3
H3	Distal	E	canonical H3	Xenopus laevis	P02302
H4	Proximal	B	canonical H4	Xenopus laevis	P62799
H4	Distal	F	canonical H4	Xenopus laevis	P62799
H2A	Proximal	C	canonical H2A	Xenopus laevis	P06897
H2A	Distal	G	canonical H2A	Xenopus laevis	P06897
H2B	Proximal	D	canonical H2B	Xenopus tropicalis	Q28D68
H2B	Distal	H	canonical H2B	Xenopus tropicalis	Q28D68

Chain	Name	UID
N	Polyubiquitin-B	P0CG47
O	Polyubiquitin-B	P0CG47
W	Chromatin-remodeling ATPase	P32657

Chain	Variant	Length
I	601	159
J	601	160

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6FTX