NucleosomeDB 6C0W

Exp. Method	EM
Resolution, Å	4
Release Date	2018-01-17
Update Date	2024-03-13
Authors	Pentakota, S., Zhou, K., Smith, C., Maffini, S., Petrovic, A., Morgan, G.P., Weir, J.R., Vetter, I.R., Musacchio, A., Luger, K.
Publication	PMID: 29280735
doi	10.7554/eLife.33442
Related structures	6EQT
RCSB PDB	6C0W
EMDB	EMD-7326
Q-score	0.39

	Side	Chain	HistoneDB Variant	Taxa	UID
H3	Proximal	A	cenH3	Homo sapiens	P49450
H3	Distal	E	cenH3	Homo sapiens	P49450
H4	Proximal	B	canonical H4	Homo sapiens	P62805
H4	Distal	F	canonical H4	Homo sapiens	P62805
H2A	Proximal	C	canonical H2A	Homo sapiens	Q93077
H2A	Distal	G	canonical H2A	Homo sapiens	Q93077
H2B	Proximal	D	canonical H2B	Homo sapiens	P62807
H2B	Distal	H	canonical H2B	Homo sapiens	P62807

Chain	Name	UID
K	Centromere protein N	Q96H22

Chain	Variant	Length
I	601	139
J	601	139

H2A

H2B

DNA

Other

Orthographic Superimpose 1KX5 Show axes

X - Y

X - Z

Z - Y

3DNA

Relative Twist

Sequence on X-axis is numbered relative to the dyad base pair.

H3p chain A

H4p chain B

H2Ap chain C

H2Bp chain D

H3d chain E

H4d chain F

H2Ad chain G

H2Bd chain H

DNA top chain I, bot chain J

Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.

6C0W