2CV5

Crystal structure of human nucleosome core particle

Exp. Method X-ray
Resolution, Å 2.5
Release Date 2005-06-28
Update Date 2024-03-13
Authors Tsunaka, Y., Kajimura, N., Tate, S., Morikawa, K.
doi 10.1093/nar/gki663
Publication PMID: 15951514
Related structures
RCSB PDB 2CV5
Core histones in Nucleosome-like particles:
Side Chain HistoneDB Variant Taxa UID
H3 Proximal A canonical H3 Homo sapiens P68431
Distal E canonical H3 Homo sapiens P68431
H4 Proximal B canonical H4 Homo sapiens P62805
Distal F canonical H4 Homo sapiens P62805
H2A Proximal C canonical H2A Homo sapiens P04908
Distal G canonical H2A Homo sapiens P04908
H2B Proximal D canonical H2B Homo sapiens O60814
Distal H canonical H2B Homo sapiens O60814
DNA:
Chain Variant Length
I alphasat_146 146
J alphasat_146 146

H3

H4

H2A

H2B

DNA

Other


Aligned nucleosome coordinates

Nucleosome reference frame definition

DNA relative twist and local base step parameters

Sequence on X-axis is numbered relative to the dyad base pair.

Atomic contacts between nucleosomal entities.


Hover the mouse cursor on the barplot to show contact information. Oncogenic mutations of non-histone proteins in contact are highlighted.